USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: TAGL_HUMAN USC-OGP 2-DE database:  TAGL_HUMAN TAGL_HUMAN General information about the entry View entry in simple text format Entry name TAGL_HUMAN Primary accession number Q01995 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Transgelin; AltName: Full=22 kDa actin-binding protein; AltName: Full=Protein WS3-10; AltName: Full=Smooth muscle protein 22-alpha; Short=SM22-alpha;. Gene name Name=TAGLN Synonyms=SM22, WS3-10 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1309: pI=8.56; Mw=22246 SPOT OGP-1323: pI=6.28; Mw=18705 Cross-references UniProtKB/Swiss-Prot Q01995; TAGL_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TAGL_HUMAN Primary accession number Q01995 Secondary accession number(s) O15542 Sequence was last modified on  January 23, 2007 (version 4) Annotations were last modified on  March 15, 2017 (version 166) Name and origin of the protein Description RecName: Full=Transgelin; AltName: Full=22 kDa actin-binding protein; AltName: Full=Protein WS3-10; AltName: Full=Smooth muscle protein 22-alpha; Short=SM22-alpha; Gene name Name=TAGLN Synonyms=SM22, WS3-10 Encoded on Name=TAGLN; Synonyms=SM22, WS3-10 Keywords Acetylation; Actin-binding; Complete proteome; Cytoplasm; Methylation; Muscle protein; Phosphoprotein; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M95787; AAA58351.1; -; mRNA EMBL M83106; AAA58375.1; -; mRNA EMBL AF013711; AAC21582.1; -; Genomic_DNA EMBL D17409; BAA21811.1; -; mRNA EMBL D84342; BAA21839.1; -; Genomic_DNA EMBL BC004927; AAH04927.1; -; mRNA EMBL BC065829; AAH65829.1; -; mRNA CCDS CCDS8381.1; -; . PIR JC5577; JS0774; . RefSeq NP_001001522.1; NM_001001522.1; . RefSeq NP_003177.2; NM_003186.3; . UniGene Hs.410977; -; . ProteinModelPortal Q01995; -; . SMR Q01995; -; . BioGrid 112739; 50; . IntAct Q01995; 6; . MINT MINT-2805284; -; . STRING 9606.ENSP00000278968; -; . iPTMnet Q01995; -; . PhosphoSitePlus Q01995; -; . SwissPalm Q01995; -; . BioMuta TAGLN; -; . DMDM 3123283; -; . REPRODUCTION-2DPAGE IPI00216138; -; . UCD-2DPAGE Q01995; -; . EPD Q01995; -; . PaxDb Q01995; -; . PeptideAtlas Q01995; -; . PRIDE Q01995; -; . DNASU 6876; -; . Ensembl ENST00000278968; ENSP00000278968; ENSG00000149591; . Ensembl ENST00000392951; ENSP00000376678; ENSG00000149591; . Ensembl ENST00000525531; ENSP00000432054; ENSG00000149591; . Ensembl ENST00000530649; ENSP00000431941; ENSG00000149591; . Ensembl ENST00000532870; ENSP00000432282; ENSG00000149591; . GeneID 6876; -; . KEGG hsa:6876; -; . CTD 6876; -; . DisGeNET 6876; -; . GeneCards TAGLN; -; . HGNC HGNC:11553; TAGLN; . HPA CAB001447; -; . HPA HPA019467; -; . MIM 600818; gene; . neXtProt NX_Q01995; -; . OpenTargets ENSG00000149591; -; . PharmGKB PA36324; -; . eggNOG KOG2046; Eukaryota; . eggNOG COG5199; LUCA; . GeneTree ENSGT00550000074447; -; . HOGENOM HOG000232113; -; . HOVERGEN HBG005186; -; . InParanoid Q01995; -; . KO K20526; -; . OMA VEWIVVQ; -; . OrthoDB EOG091G0LY2; -; . PhylomeDB Q01995; -; . TreeFam TF313921; -; . SIGNOR Q01995; -; . ChiTaRS TAGLN; human; . GeneWiki TAGLN; -; . GenomeRNAi 6876; -; . PRO PR:Q01995; -; . Proteomes UP000005640; Chromosome 11; . Bgee ENSG00000149591; -; . CleanEx HS_TAGLN; -; . ExpressionAtlas Q01995; baseline and differential; . Genevisible Q01995; HS; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0030855; P:epithelial cell differentiation; IDA:UniProtKB; . GO GO:0007517; P:muscle organ development; TAS:ProtInc; . CDD cd00014; CH; 1; . Gene3D 1.10.418.10; -; 1; . InterPro IPR000557; Calponin_repeat; . InterPro IPR001715; CH-domain; . InterPro IPR003096; SM22_calponin; . InterPro IPR029976; TAGLN; . PANTHER PTHR18959:SF65; PTHR18959:SF65; 1; . Pfam PF00402; Calponin; 1; . Pfam PF00307; CH; 1; . PRINTS PR00888; SM22CALPONIN; . SMART SM00033; CH; 1; . SUPFAM SSF47576; SSF47576; 1; . PROSITE PS01052; CALPONIN_1; 1; . PROSITE PS51122; CALPONIN_2; 1; . PROSITE PS50021; CH; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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